openshift copy file to persistent volume

Your data sits there. The --delete flag may be used to delete any files in the remote directory that extract the files. directory or a pod directory. This method skips the normal matching and binding process. You can see an example by reviewing the backup-block template. This paper explores how can we add a disk, create a file system on the immutable OS (RHCOS) in the OpenShift 4.x environment. secretPath is the path to the secret defined in Vault. Now that the robots.txt file is uploaded, the request for it will succeed. You can use the CLI to copy local files to or from a remote directory in a container. Become a Red Hat partner and get support in building customer solutions. using the rsync command. according to the normal binding process. The cluster administrator should first consider configuring volumeName and claimRef are specified. oc rsync :/remote/dir ./local/dir: Copy the directory from the pod to the local directory. A PersistentVolume object is a storage resource in an OpenShift Container Platform cluster. To learn more, see our tips on writing great answers. This post is based on one of OpenShifts interactive learning scenarios. let's say you have a test folder in which you have test.json that you want to copy so here would be the command. Therefore, you can control the behavior via the same flags used calls. . Charlotte Ellett. It can also be used to copy source code changes into a running pod for development debugging, when the running pod supports hot reload of source files. the directory does not exist, but rsync is used for copy, the directory is Cinder, In Windows, the cwRsync client should be installed and added to the PATH for This requires that the remote container also have the rsync command. Does Cast a Spell make you a spellcaster? The backup script contains a little magic especially for this case: Setting the sticky bit on the sed executable makes the effective UID of sed processes that of the /usr/bin/sed executable files owner -- in this case, root -- rather than that of the user who executed it. If you've followed the security recommendations to setup an NFS server to provision persistent storage to your OpenShift Container Platform (OCP) cluster, the owner ID 65534 is used as an example. mongodb|MONGODB and refer to Therefore, be careful, and if necessary, be more specific by using --include or --exclude options to limit the set of files or directories copied. PVC will be bound regardless of whether the PV satisfies the PVCs label Is lock-free synchronization always superior to synchronization using locks? In the above command, the --no-perms option is also used, because the target directory in the container, although writable by the group that the container is run as, is owned by a different user. Further to create the persistent volume (PV) and storage class to be used for the containers. This pod is responsible for running the backup script. You can find a summary of the key commands covered below. matching and binding process by inspecting a Bound PV and PVC pair for the Check that all the resource objects have been deleted: Although we've deleted the dummy application, the persistent volume claim still exists, and can later be mounted against the actual application to which the data belongs. Manage persistent volume access in Kubernetes | Red Hat Developer You are here Read developer tutorials and download Red Hat software for cloud application development. To copy a directory to a local machine, the form of the command you need to run is: oc rsync :/remote/dir ./local/dir. Even though NFSs root_squash maps root (UID 0) to nfsnobody (UID 65534), NFS exports can have arbitrary owner IDs. rev2023.3.1.43269. To try it and our other tutorials without needing to install OpenShift, visit https://learn.openshift.com. This is a useful tool for copying database archives to and from your pods for backup and restore purposes. The data is saved in files and folders, and presented to both the system storing it and the system retrieving it in the same format. What other topics would you like to see in the future on this blog? There you are: A tool to backup, migrate, or clone your PVs inside an OpenShift Kubernetes cluster! manually invoking oc rsync repeatedly, including any arguments normally passed You can Part two went into live synchronization. Part one covered manually copying files into and out of a container. Why must a product of symmetric random variables be symmetric? Therefore, you can control the behavior via the same flags used You'll be using just the oc command line tool. The PVCs access modes and resource requests In the case that you want to use a standard rsync command line option that is CentOS7 based image The v3.x images are available on DockerHub. This article focuses on backing up, migrating, and restoring storage layer entities: Kubernetes PVCs and the Persistent Volumes that back them. To access it from a web browser, we also need to expose it by creating a Route: We can also monitor the deployment of the application by running: This command will exit once the deployment has completed and the web application is ready. You can request storage by creating PersistentVolumeClaim objects in your If rsync is not found locally or in the remote container, a tar archive October 5, 2017 | by Only PVCs created from that class are allowed to expand. Copying Files to or from a Container. In short, this solution makes it easy to: This post describes the PVC backup system I put together. In the example I am looking at they use NFS PV and it is quite simple as I can access the NFS file system associated with a PV and I can add files to it. Label the project where validation by our webhook should be in effect: Check the Custom Admission Controllers section in the OpenShift documentation for more information. Red Hat Training. If there is more than one container running within a pod, you'll need to specify which container you want to work with by using the --container option. database. $ kubectl apply --filename spc-vault-database.yaml Copy The vault-database SecretProviderClass describes one secret object: objectName is a symbolic name for that secret, and the file name to write to. Making statements based on opinion; back them up with references or personal experience. A PersistentVolumeClaim is a secretKey is a key name within that secret. volumeName field. but ordinary PVs and PVCs will have it set to "yes". I wanted to share the challenges we faced in putting together the OpenShift backups, restores, hardware migrations, and cluster-cloning features we needed to preserve users Persistent Volume Claims (PVCs). only the contents of the directory are copied to the destination. To ensure only the contents of the directory on the container are copied, and not the directory itself, suffix the remote directory with /.. directory itself is copied to the destination with all its contents. You can find a summary of the key commands covered below. If, instead of copying a single file, you want to copy a complete directory, leave off the --include and --exclude options. The files we copied to the persistent volume should again be visible. Transferring Files In and Out of Containers in OpenShift, Part 1: Manually Copying Files, Using QoS DSCP in OpenShift Container Platform, Deploying CockroachDB on one Red Hat OpenShift cluster, Deploy OpenShift on OpenStack Provider Networks. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, Openshift Container Storage - copy file to persistent volume, The open-source game engine youve been waiting for: Godot (Ep. 29.3. OpenStack In addition to uploading files into a running container, you might also want to download files. Creating a cluster with kubeadm Customizing components with the kubeadm API Options for Highly Available Topology Creating Highly Available Clusters with kubeadm Set up a High Availability etcd Cluster with kubeadm Configuring each kubelet in your cluster using kubeadm Dual-stack support with kubeadm Installing Kubernetes with kOps manually invoking oc rsync repeatedly, including any arguments normally passed In the upcoming OpenShift 4.8 release, our teamwill deliver complete provider networks support when deploying on Red Hat OpenStack. oc set volume dc/dummy --add --name=tmp-mount --claim-name= --mount-path /mnt: Mount an existing persistent volume against a dummy application pod at the directory /mnt so that files can be copied into the persistent volume using oc rsync. Undo working copy modifications of one file in Git? When you're done and want to delete the dummy application, use oc delete to delete it, using a label selector of run=dummy to ensure we only delete the resource objects related to the dummy application. Part one: Manually Copying Files Expanding Persistent Volume Claims with a File System. hferentschik added a commit to hferentschik/minishift that referenced this issue Adding method to wait for completion of persisten 4404475 oc rsync ./local/dir :/remote/dir --strategy=tar: Copy the directory to the remote directory in the pod. Deploy container and mount volume - CLI. Your claim will remain The --strategy=tar option indicates to use tar to copy the files rather than rsync. cases. File storage, also called file-level or file-based storage, stores data in a hierarchical structure. Just be aware that this will copy everything, including notionally hidden files or directories starting with .. Specifying a claimRef in a PV does not prevent the specified PVC from being The other layer is the underlying storage. Use the appropriate commands to restore the database in the new database Expanding persistent volume claims (PVCs) with a file system Expanding PVCs based on volume types that need file system resizing, such as GCE PD, EBS, and Cinder, is a two-step process. In order to do this, you'll need to deploy a dummy application to mount the persistent volume against. file system changes, and synchronizes changes when they occur. Step 1 - Creating a project The first thing we need to do is create a project where we can deploy the application that we will be working with. kubectl cp /path/to/file my-pod:/path/to/file. reclaimed according to a Retain reclaim policy, its claimRef PVC from binding to the specified PV before yours does. The extent of . We are going to use one of the two types of Admission Webhooks, the Validating admission webhooks, that allow for the use of validating webhooks to enforce custom admission policies. Support for copying local files to or from a container is built into the CLI. volume binding before resorting to setting claimRefs on behalf of users. To upload the robots.txt file, we run: oc rsync . container from the copied database archive directory: You now have two MySQL database pods running in your project with the archived In addition to copying a single file, a directory can also be copied. As you saw above, in this case, the pod would be blog-1-9j3p3. We use the oc run command because it just creates a deployment configuration and managed pod. Using the --watch option causes the command to monitor the source path for any In To see more information on each oc command, run it with the --help option. ensure your claim gets bound to the volume you want, you must ensure that both You can use the CLI to copy local files to or from a remote directory in a container OpenShift Do (odo) is a fast and easy . Jose Antonio Gonzalez Prada. kubectl cp <file-spec-src> <file-spec-dest>. To copy our single database file from our pod, we run: oc rsync blog-1-9j3p3:/opt/app-root/src/db.sqlite3 . Fibre your claim so that nobody elses claim can bind to it before yours does. If you wanted to rename the directory at the time of copying it, you should first create the target directory with the name you want to use: Then, to copy the files, use this command: oc rsync blog-1-9j3p3:/opt/app-root/src/media/. Migrate between different storage types (NFS/NAS to iSCSI/SAN, for example). namespace no longer exists. alternative to running oc rsync. A hostPath PersistentVolume uses a file or directory on the Node to emulate network-attached storage. oc set volume dc/dummy --add --name=tmp-mount --claim-name=data --mount-path /mnt. Replace mysql|MYSQL with pgsql|PGSQL or This means that, although the files can be added to the directory, permissions on existing directories cannot be changed. We will discuss the security implications of this UID munging later in this post. However when I use Openshift Container Storage storage class (let's say cephfs), how can I actually add files to the PV (the operator that I want to install says that database ODBC drivers must be copied to PV and mounted). 40 -rw-rw-r-- 1 1000040000 root 39936 Jun 6 05:53 db.sqlite3. There are at least 2 steps involved in scheduling your first container on a Openshift cluster. are not in the local directory. To monitor the startup of the pod and ensure it's deployed, run: Once it's running, you can see that a more limited set of resources is created, compared to what would be created when using oc new-app. Owner 65534 is not required for NFS exports. In this post, we'll cover manually copying files into and out of a container. GCE This is because the persistent volume is no longer mounted, and you're looking at the directory within the local container file system. The PV will only be able to bind to a PVC that has the same name and The PVs and PVCs where you oc cp /:/cepfs/.. I am using KVM, so the second disk will appear as . 30.2. Build, deploy and manage your applications across cloud- and on-premise infrastructure, Single-tenant, high-availability Kubernetes clusters in the public cloud, The fastest way for developers to build, host and scale applications in the public cloud. Ceph You can provision volumes either statically or dynamically for file-based storage. If you are mounting a persistent volume into the container for your application and you need to copy files into it, then oc rsync can be used in the same way as described previously to upload files. In this post Graham will show the new persistent volumes features of version 1.1.3 of the All-in-One OpenShift virtual machine. It should be empty at this point. At the moment, these features are not implemented directly in Kubernetes, and it doesn't come out-of-the-box with any Kubernetes distribution. iSCSI, This post is based on one of OpenShifts interactive learning scenarios. Transferring Files In and Out of Containers in OpenShift This is part one of a three-part series. If you are mounting a persistent volume into the container for your application and you need to copy files into it, then oc rsync can be used in the same way as described previously to upload files. selector, access modes, and resource requests. name: Just as with standard rsync, if the directory name ends in a path separator (/), One of the properties of container images is that they are immutable. Can non-Muslims ride the Haramain high-speed train in Saudi Arabia? In this post, you've learned about oc commands that you can use to transfer files to and from a running container. First, find out your pvc's mountPath. That is, although you can make changes to the local container file system of a running image, the changes are not permanent. directory or a pod directory. In this post, we're going to cover how to transfer files between your local machine and a running container. Look for completion of the re-deployment: Check the contents of the target directory. As the templates are responsible for creating the ServiceAccount and assigning our custom ClusterRole to that ServiceAccount, you dont need extra commands to start the backup process (this does not change from what we have seen before, in the Backup point). ./local/dir: Copy the contents of the directory from the pod to the local directory. Transferring Files In and Out of Containers in OpenShift, Part 3: Copying Files to a New Persistent Volume, Using QoS DSCP in OpenShift Container Platform, Deploying CockroachDB on one Red Hat OpenShift cluster, Deploy OpenShift on OpenStack Provider Networks. oc rsync :/remote/dir ./local/dir --delete: Copy the contents of the directory from the pod to the local directory. Not the answer you're looking for? only send files that are different between the source and the destination. GlusterFS, On the worker nodes, let's add an extra disk. With those concepts out of the way, it's time for a demonstration. this case, the administrator can specify the PVC in the PV using the claimRef blog-1-9j3p3:/opt/app-root/src/htdocs --exclude=* --include=robots.txt --no-perms. PersistentVolumeClaim to bind to, you can specify the PV in your PVC using the First, we create a robots.txt file in our local directory which contains: For the web application being used, it hosts static files out of the htdocs subdirectory of the application source code. If youve been reading closely, you may have noticed that this solution is suitable only in fairly controlled cluster environments, because it has some security caveats: This is where Admission Webhooks come in handy. We have been able to see during the reading of all the chapters how I faced the challenge to implement backup-restore / migration capabilities in an OpenShift cluster with my artisanal solution. set the volumeName and/or claimRef yourself will have no such annotation, Comment and let us know! The source argument of the oc rsync command must point to either a local When specifying a pod directory the directory name must be prefixed with the pod In the upcoming OpenShift 4.8 release, our teamwill deliver complete provider networks support when deploying on Red Hat OpenStack. Create a file named blob-nfs-pvc.yaml and copy in the following YAML. A service is not created, as we don't need the application we're running here (an instance of the Apache HTTPD server in this case) to actually be contactable. Share persistent volume claims amongst containers in Kubernetes/OpenShift, Can't Share a Persistent Volume Claim for an EBS Volume between Apps. With this Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. MySQL is used in the example below. The oc rsync command exposes fewer command line options than standard rsync. Overview. On an existing pod, you can also create a sidecar container with, e.g, busybox to mount the same PV and provide file copy tools if they're not present in the primary container. Permissions on directories and files should be set as part of the process of building the image. You just need to detach your current PVC (the backup source) and attach the PVC with the data you backed up (the backup target): This won't remove the original backup source PVC, so with a command likeoc rollback dc/myapp, you can switch back to it. copy will fail. 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[security.openshift.io/v1], StorageVersionMigration [migration.k8s.io/v1alpha1], VolumeSnapshot [snapshot.storage.k8s.io/v1], VolumeSnapshotClass [snapshot.storage.k8s.io/v1], VolumeSnapshotContent [snapshot.storage.k8s.io/v1], BrokerTemplateInstance [template.openshift.io/v1], TemplateInstance [template.openshift.io/v1], UserIdentityMapping [user.openshift.io/v1], Configuring the distributed tracing platform, Configuring distributed tracing data collection, Preparing your cluster for OpenShift Virtualization, Specifying nodes for OpenShift Virtualization components, Installing OpenShift Virtualization using the web console, Installing OpenShift Virtualization using the CLI, Uninstalling OpenShift Virtualization using the web console, Uninstalling OpenShift Virtualization using the CLI, Additional security privileges granted for kubevirt-controller and virt-launcher, Triggering virtual machine failover by resolving a failed node, Installing the QEMU guest agent on virtual machines, Viewing the QEMU guest agent information for virtual machines, Managing config maps, secrets, and service accounts in virtual machines, Installing VirtIO driver on an existing Windows virtual machine, Installing VirtIO driver on a new Windows virtual machine, Configuring PXE booting for virtual machines, Enabling dedicated resources for a virtual machine, Importing virtual machine images with data volumes, Importing virtual machine images into block storage with data volumes, Importing a Red Hat Virtualization virtual machine, Importing a VMware virtual machine or template, Enabling user permissions to clone data volumes across namespaces, Cloning a virtual machine disk into a new data volume, Cloning a virtual machine by using a data volume template, Cloning a virtual machine disk into a new block storage data volume, Configuring the virtual machine for the default pod network, Attaching a virtual machine to a Linux bridge network, Configuring IP addresses for virtual machines, Configuring an SR-IOV network device for virtual machines, Attaching a virtual machine to an SR-IOV network, Viewing the IP address of NICs on a virtual machine, Using a MAC address pool for virtual machines, Configuring local storage for virtual machines, Reserving PVC space for file system overhead, Configuring CDI to work with namespaces that have a compute resource quota, Uploading local disk images by using the web console, Uploading local disk images by using the virtctl tool, Uploading a local disk image to a block storage data volume, Managing offline virtual machine snapshots, Moving a local virtual machine disk to a different node, Expanding virtual storage by adding blank disk images, Cloning a data volume using smart-cloning, Using container disks with virtual machines, Re-using statically provisioned persistent volumes, Enabling dedicated resources for a virtual machine template, Migrating a virtual machine instance to another node, Monitoring live migration of a virtual machine instance, Cancelling the live migration of a virtual machine instance, Configuring virtual machine eviction strategy, Managing node labeling for obsolete CPU models, Diagnosing data volumes using events and conditions, Viewing information about virtual machine workloads, OpenShift cluster monitoring, logging, and Telemetry, Installing the OpenShift Serverless Operator, Listing event sources and event source types, Serverless components in the Administrator perspective, Integrating Service Mesh with OpenShift Serverless, Cluster logging with OpenShift Serverless, Configuring JSON Web Token authentication for Knative services, Configuring a custom domain for a Knative service, Setting up OpenShift Serverless Functions, Function project configuration in func.yaml, Accessing secrets and config maps from functions, Integrating Serverless with the cost management service, Using NVIDIA GPU resources with serverless applications. 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